HL_4WT8_218
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CUCAGUCGGUAGAG
- Length
- 14 nucleotides
- Bulged bases (A, C, G, U)
- 17C, 18G
- QA status
- Incomplete nucleotides: 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WT8|1|DV|C|11
4WT8|1|DV|U|12
4WT8|1|DV|C|13
4WT8|1|DV|A|14
4WT8|1|DV|G|15
4WT8|1|DV|U|16
4WT8|1|DV|C|17
4WT8|1|DV|G|18
4WT8|1|DV|G|19
4WT8|1|DV|U|20
4WT8|1|DV|A|21
4WT8|1|DV|G|22
4WT8|1|DV|A|23
4WT8|1|DV|G|24
Current chains
- Chain DV
- DNA (55-MER)
Nearby chains
- Chain D1
- Large subunit ribosomal RNA; LSU rRNA
- Chain D2
- tRNA (5'-D(*AP*UP*CP*CP*CP*CP*GP*UP*GP*UP*CP*CP*UP*UP*GP*GP*UP*UP*CP*G)-3')
- Chain D4
- Transfer RNA; tRNA
Coloring options: