HL_4WT8_224

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UAGUUGCCAGCGGUUCGGCCGGGCACUCUA

Length

30 nucleotides

Bulged bases

4WT8|1|Ab|U|1108, 4WT8|1|Ab|C|1112, 4WT8|1|Ab|U|1118, 4WT8|1|Ab|U|1119, 4WT8|1|Ab|C|1120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT8|1|Ab|U|1105
4WT8|1|Ab|A|1106
4WT8|1|Ab|G|1107
4WT8|1|Ab|U|1108
4WT8|1|Ab|U|1109
4WT8|1|Ab|G|1110
4WT8|1|Ab|C|1111
4WT8|1|Ab|C|1112
4WT8|1|Ab|A|1113
4WT8|1|Ab|G|1114
4WT8|1|Ab|C|1115
4WT8|1|Ab|G|1116
4WT8|1|Ab|G|1117
4WT8|1|Ab|U|1118
4WT8|1|Ab|U|1119
4WT8|1|Ab|C|1120
4WT8|1|Ab|G|1121
4WT8|1|Ab|G|1122
4WT8|1|Ab|C|1123
4WT8|1|Ab|C|1124
4WT8|1|Ab|G|1125
4WT8|1|Ab|G|1126
4WT8|1|Ab|G|1127
4WT8|1|Ab|C|1128
4WT8|1|Ab|A|1129
4WT8|1|Ab|C|1130
4WT8|1|Ab|U|1131
4WT8|1|Ab|C|1132
4WT8|1|Ab|U|1133
4WT8|1|Ab|A|1134

Current chains

Chain Ab

RNA (1504-MER)

Nearby chains

Chain AI

30S ribosomal protein S9

Chain AJ

30S ribosomal protein S10