HL_4WT8_225

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGCGAAAGCG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_225 not in the Motif Atlas

Geometric match to HL_8KAL_008

Geometric discrepancy: 0.3039

The information below is about HL_8KAL_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

4WT8|1|Ab|C|1146
4WT8|1|Ab|G|1147
4WT8|1|Ab|C|1148
4WT8|1|Ab|G|1149
4WT8|1|Ab|A|1150
4WT8|1|Ab|A|1151
4WT8|1|Ab|A|1152
4WT8|1|Ab|G|1153
4WT8|1|Ab|C|1154
4WT8|1|Ab|G|1155

Current chains

Chain Ab

RNA (1504-MER)

Nearby chains

Chain AA

30S ribosomal protein S2

Chain AG

30S ribosomal protein S7