HL_4WT8_228

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGUCUCC

Length

7 nucleotides

Bulged bases

4WT8|1|Bb|U|823, 4WT8|1|Bb|U|825

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_228 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.3124

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

4WT8|1|Bb|G|821
4WT8|1|Bb|G|822
4WT8|1|Bb|U|823
4WT8|1|Bb|C|824
4WT8|1|Bb|U|825
4WT8|1|Bb|C|826
4WT8|1|Bb|C|827

Current chains

Chain Bb

RNA (1504-MER)

Nearby chains

Chain BA

30S ribosomal protein S2

Chain BS

30S ribosomal protein S18