HL_4WU1_096

3D structure

PDB id

4WU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WU1_096 not in the Motif Atlas

Homologous match to HL_5J7L_195

Geometric discrepancy: 0.1155

The information below is about HL_5J7L_195

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

4WU1|1|14|C|2551
4WU1|1|14|U|2552
4WU1|1|14|G|2553
4WU1|1|14|U|2554
4WU1|1|14|U|2555
4WU1|1|14|C|2556
4WU1|1|14|G|2557

Current chains

Chain 14

23S ribosomal RNA

Nearby chains