HL_4WU1_101

3D structure

PDB id

4WU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGGCGUCAAGCCG

Length

13 nucleotides

Bulged bases

4WU1|1|14|U|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WU1_101 not in the Motif Atlas

Geometric match to HL_8H9D_001

Geometric discrepancy: 0.277

The information below is about HL_8H9D_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.1

Basepair signature

cWW-F

Number of instances in this motif group

8

Unit IDs

4WU1|1|14|C|2791
4WU1|1|14|G|2792
4WU1|1|14|G|2793
4WU1|1|14|C|2794
4WU1|1|14|G|2795
4WU1|1|14|U|2797
4WU1|1|14|C|2798
4WU1|1|14|A|2799
4WU1|1|14|A|2801
4WU1|1|14|G|2802
4WU1|1|14|C|2803
4WU1|1|14|C|2804
4WU1|1|14|G|2805

Current chains

Chain 14

23S ribosomal RNA

Nearby chains