HL_4WU1_227
3D structure
- PDB id
- 4WU1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- CCUUCGGG
- Length
- 8 nucleotides
- Bulged bases
- 4WU1|1|1G|U|421, 4WU1|1|1G|C|422
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WU1_227 not in the Motif Atlas
- Geometric match to HL_7MLW_004
- Geometric discrepancy: 0.3674
- The information below is about HL_7MLW_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_83003.1
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
4WU1|1|1G|C|418
4WU1|1|1G|C|419
4WU1|1|1G|U|420
4WU1|1|1G|U|421
4WU1|1|1G|C|422
4WU1|1|1G|G|423
4WU1|1|1G|G|424
4WU1|1|1G|G|425
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 22
- 30S ribosomal protein S3
- Chain 32
- 30S ribosomal protein S4
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