HL_4WWW_061

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WWW_061 not in the Motif Atlas

Geometric match to HL_4V9F_007

Geometric discrepancy: 0.3591

The information below is about HL_4V9F_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_36488.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

4WWW|1|RA|C|1092
4WWW|1|RA|G|1093
4WWW|1|RA|U|1094
4WWW|1|RA|A|1095
4WWW|1|RA|A|1096
4WWW|1|RA|U|1097
4WWW|1|RA|A|1098
4WWW|1|RA|G|1099

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R4

50S ribosomal protein L36

Chain RG

50S ribosomal protein L6

Chain RI

50S ribosomal protein L11