HL_4WWW_114

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4WWW|1|XA|U|421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WWW_114 not in the Motif Atlas

Homologous match to HL_5J7L_011

Geometric discrepancy: 0.1386

The information below is about HL_5J7L_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

4WWW|1|XA|C|419
4WWW|1|XA|U|420
4WWW|1|XA|U|421
4WWW|1|XA|C|422
4WWW|1|XA|G|423
4WWW|1|XA|G|424

Current chains

Chain XA

16S rRNA

Nearby chains

Chain QK

30S ribosomal protein S11

Chain XC

30S ribosomal protein S3

Chain XD

30S ribosomal protein S4