HL_4WWW_141

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

4WWW|1|YA|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WWW_141 not in the Motif Atlas

Geometric match to HL_7RQB_006

Geometric discrepancy: 0.1286

The information below is about HL_7RQB_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

4WWW|1|YA|G|194
4WWW|1|YA|A|195
4WWW|1|YA|A|196
4WWW|1|YA|A|197
4WWW|1|YA|C|198
4WWW|1|YA|A|199
4WWW|1|YA|U|200
4WWW|1|YA|C|201

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YL

50S ribosomal protein L15

Chain YX

50S ribosomal protein L28