HL_4WWW_170
3D structure
- PDB id
- 4WWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to CEM-101
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGCGACGGUUGUCC
- Length
- 14 nucleotides
- Bulged bases
- 4WWW|1|YA|A|1453, 4WWW|1|YA|C|1454, 4WWW|1|YA|G|1459, 4WWW|1|YA|U|1460
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WWW_170 not in the Motif Atlas
- Geometric match to HL_2Y9H_003
- Geometric discrepancy: 0.2004
- The information below is about HL_2Y9H_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
4WWW|1|YA|G|1449
4WWW|1|YA|G|1450
4WWW|1|YA|C|1451
4WWW|1|YA|G|1452
4WWW|1|YA|A|1453
4WWW|1|YA|C|1454
4WWW|1|YA|G|1455
4WWW|1|YA|G|1456
4WWW|1|YA|U|1457
4WWW|1|YA|U|1458
4WWW|1|YA|G|1459
4WWW|1|YA|U|1460
4WWW|1|YA|C|1461
4WWW|1|YA|C|1462
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YN
- 50S ribosomal protein L17
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