HL_4WWW_192

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WWW_192 not in the Motif Atlas

Homologous match to HL_7A0S_057

Geometric discrepancy: 0.1523

The information below is about HL_7A0S_057

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

4WWW|1|YA|C|2374
4WWW|1|YA|G|2375
4WWW|1|YA|A|2376
4WWW|1|YA|A|2377
4WWW|1|YA|A|2378
4WWW|1|YA|G|2379

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y1

50S ribosomal protein L33

Chain YO

50S ribosomal protein L18

Chain YW

50S ribosomal protein L27