HL_4WWW_197

3D structure

PDB id

4WWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to CEM-101

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WWW_197 not in the Motif Atlas

Homologous match to HL_7RQB_063

Geometric discrepancy: 0.0813

The information below is about HL_7RQB_063

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

4WWW|1|YA|C|2594
4WWW|1|YA|G|2595
4WWW|1|YA|U|2596
4WWW|1|YA|G|2597
4WWW|1|YA|A|2598
4WWW|1|YA|G|2599

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YC

50S ribosomal protein L2