HL_4WZD_050
3D structure
- PDB id
- 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UAUUGAAGCA
- Length
- 10 nucleotides
- Bulged bases
- 4WZD|1|14|C|574||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WZD_050 not in the Motif Atlas
- Homologous match to HL_9DFE_016
- Geometric discrepancy: 0.0634
- The information below is about HL_9DFE_016
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.7
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 139
Unit IDs
4WZD|1|14|U|566||||P_1
4WZD|1|14|A|567||||P_1
4WZD|1|14|U|568||||P_1
4WZD|1|14|U|569||||P_1
4WZD|1|14|G|570||||P_1
4WZD|1|14|A|571||||P_1
4WZD|1|14|A|572||||P_1
4WZD|1|14|G|573||||P_1
4WZD|1|14|C|574||||P_1
4WZD|1|14|A|575||||P_1
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 29
- 50S ribosomal protein L3
- Chain 35
- 50S ribosomal protein L15
- Chain 95
- 50S ribosomal protein L21
- Chain J5
- 50S ribosomal protein L32
Coloring options: