HL_4WZD_153
3D structure
- PDB id
- 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UAUUGAAGCA
- Length
- 10 nucleotides
- Bulged bases
- 4WZD|1|1H|C|574||||P_1
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WZD_153 not in the Motif Atlas
- Homologous match to HL_9DFE_016
- Geometric discrepancy: 0.0494
- The information below is about HL_9DFE_016
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.9
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
4WZD|1|1H|U|566||||P_1
4WZD|1|1H|A|567||||P_1
4WZD|1|1H|U|568||||P_1
4WZD|1|1H|U|569||||P_1
4WZD|1|1H|G|570||||P_1
4WZD|1|1H|A|571||||P_1
4WZD|1|1H|A|572||||P_1
4WZD|1|1H|G|573||||P_1
4WZD|1|1H|C|574||||P_1
4WZD|1|1H|A|575||||P_1
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 21
- 50S ribosomal protein L3
- Chain 78
- 50S ribosomal protein L15
- Chain D8
- 50S ribosomal protein L21
- Chain N8
- 50S ribosomal protein L32
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