HL_4WZD_224
3D structure
- PDB id
- 4WZD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with cognate tRNA-Tyr in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUCUGCAACCCGACC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WZD_224 not in the Motif Atlas
- Geometric match to HL_5TBW_226
- Geometric discrepancy: 0.3893
- The information below is about HL_5TBW_226
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_59342.2
- Basepair signature
- cWW-F-F-F-F-cWW-F-F
- Number of instances in this motif group
- 5
Unit IDs
4WZD|1|13|G|1311||||P_1
4WZD|1|13|G|1312||||P_1
4WZD|1|13|U|1313||||P_1
4WZD|1|13|C|1314||||P_1
4WZD|1|13|U|1315||||P_1
4WZD|1|13|G|1316||||P_1
4WZD|1|13|C|1317||||P_1
4WZD|1|13|A|1318||||P_1
4WZD|1|13|A|1319||||P_1
4WZD|1|13|C|1320||||P_1
4WZD|1|13|C|1321||||P_1
4WZD|1|13|C|1322||||P_1
4WZD|1|13|G|1323||||P_1
4WZD|1|13|A|1324||||P_1
4WZD|1|13|C|1325||||P_1
4WZD|1|13|C|1326||||P_1
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 1F
- 30S ribosomal protein Thx
- Chain 4I
- 30S ribosomal protein S13
- Chain 5I
- 30S ribosomal protein S14 type Z
- Chain AI
- 30S ribosomal protein S19
- Chain M8
- 50S ribosomal protein L31
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