HL_4WZO_188

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

4WZO|1|1H|A|2268, 4WZO|1|1H|C|2275

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WZO_188 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0681

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

4WZO|1|1H|C|2264
4WZO|1|1H|U|2265
4WZO|1|1H|A|2266
4WZO|1|1H|A|2267
4WZO|1|1H|A|2268
4WZO|1|1H|A|2269
4WZO|1|1H|G|2270
4WZO|1|1H|G|2271
4WZO|1|1H|U|2272
4WZO|1|1H|A|2273
4WZO|1|1H|A|2274
4WZO|1|1H|C|2275
4WZO|1|1H|G|2276

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 88

50S ribosomal protein L16

Chain I8

50S ribosomal protein L27