HL_4X0A_002

3D structure

PDB id

4X0A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of tRNA-processing enzyme complex 6

Experimental method

X-RAY DIFFRACTION

Resolution

3.51 Å

Loop

Sequence

GACUGAAAAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4X0A_002 not in the Motif Atlas

Homologous match to HL_5IB8_208

Geometric discrepancy: 0.3468

The information below is about HL_5IB8_208

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_14063.2

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

4X0A|1|B|G|29
4X0A|1|B|A|30
4X0A|1|B|C|31
4X0A|1|B|U|32
4X0A|1|B|G|33
4X0A|1|B|A|34
4X0A|1|B|A|35
4X0A|1|B|A|36
4X0A|1|B|A|37
4X0A|1|B|U|38
4X0A|1|B|C|39

Current chains

Chain B

RNA (73-MER)

Nearby chains