HL_4XEJ_211

3D structure

PDB id

4XEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

IRES bound to bacterial Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GUCUGCAACCCGAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4XEJ|1|A16S|G|1312
4XEJ|1|A16S|U|1313
4XEJ|1|A16S|C|1314
4XEJ|1|A16S|U|1315
4XEJ|1|A16S|G|1316
4XEJ|1|A16S|C|1317
4XEJ|1|A16S|A|1318
4XEJ|1|A16S|A|1319
4XEJ|1|A16S|C|1320
4XEJ|1|A16S|C|1321
4XEJ|1|A16S|C|1322
4XEJ|1|A16S|G|1323
4XEJ|1|A16S|A|1324
4XEJ|1|A16S|C|1325

Current chains

Chain A16S

16S ribosomal RNA

Nearby chains

Chain AS13

30S ribosomal protein S13

Chain AS14

30S ribosomal protein S14

Chain AS19

30S ribosomal protein S19

Chain ATHX

30S ribosomal protein Thx