HL_4XEJ_213

3D structure

PDB id

4XEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

IRES bound to bacterial Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGAACUGAAACAUCUCAGUAC

Length

21 nucleotides

Bulged bases

4XEJ|1|A23S|A|196, 4XEJ|1|A23S|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4XEJ|1|A23S|G|188
4XEJ|1|A23S|G|189
4XEJ|1|A23S|A|190
4XEJ|1|A23S|A|191
4XEJ|1|A23S|C|192
4XEJ|1|A23S|U|193
4XEJ|1|A23S|G|194
4XEJ|1|A23S|A|195
4XEJ|1|A23S|A|196
4XEJ|1|A23S|A|197
4XEJ|1|A23S|C|198
4XEJ|1|A23S|A|199
4XEJ|1|A23S|U|200
4XEJ|1|A23S|C|201
4XEJ|1|A23S|U|202
4XEJ|1|A23S|C|203
4XEJ|1|A23S|A|204
4XEJ|1|A23S|G|205
4XEJ|1|A23S|U|206
4XEJ|1|A23S|A|207
4XEJ|1|A23S|C|208

Current chains

Chain A23S

23S ribosomal RNA

Nearby chains

Chain AL15

50S ribosomal protein L15

Chain AL28

50S ribosomal protein L28

Chain AL34

50S ribosomal protein L34

Chain AL35

50S ribosomal protein L35