HL_4XEJ_229

3D structure

PDB id

4XEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

IRES bound to bacterial Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

UCCGAACAGGG

Length

11 nucleotides

Bulged bases

4XEJ|1|B23S|C|645

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4XEJ|1|B23S|U|639
4XEJ|1|B23S|C|640
4XEJ|1|B23S|C|641
4XEJ|1|B23S|G|642
4XEJ|1|B23S|A|643
4XEJ|1|B23S|A|644
4XEJ|1|B23S|C|645
4XEJ|1|B23S|A|646
4XEJ|1|B23S|G|647
4XEJ|1|B23S|G|648
4XEJ|1|B23S|G|649

Current chains

Chain B23S

23S ribosomal RNA

Nearby chains

Chain BL15

50S ribosomal protein L15

Chain BL33

50S ribosomal protein L33

Chain BL35

50S ribosomal protein L35