HL_4Y4O_157
3D structure
- PDB id
- 4Y4O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.3 Å
Loop
- Sequence
- CUAAAAGGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 4Y4O|1|2A|A|2268, 4Y4O|1|2A|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19870.4
- Basepair signature
- cWW-tSH-tHH-tWW-R-R-R
- Number of instances in this motif group
- 6
Unit IDs
4Y4O|1|2A|C|2264
4Y4O|1|2A|U|2265
4Y4O|1|2A|A|2266
4Y4O|1|2A|A|2267
4Y4O|1|2A|A|2268
4Y4O|1|2A|A|2269
4Y4O|1|2A|G|2270
4Y4O|1|2A|G|2271
4Y4O|1|2A|U|2272
4Y4O|1|2A|A|2273
4Y4O|1|2A|A|2274
4Y4O|1|2A|C|2275
4Y4O|1|2A|G|2276
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 20
- 50S ribosomal protein L27
- Chain 2Q
- 50S ribosomal protein L16
- Chain 2Z
- 50S ribosomal protein L25
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