HL_4YBB_192
3D structure
- PDB id
- 4YBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution structure of the Escherichia coli ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.1 Å
Loop
- Sequence
- UGACGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4YBB_192 not in the Motif Atlas
- Homologous match to HL_5J7L_190
- Geometric discrepancy: 0.0722
- The information below is about HL_5J7L_190
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
4YBB|1|DA|U|2356
4YBB|1|DA|G|2357
4YBB|1|DA|A|2358
4YBB|1|DA|C|2359
4YBB|1|DA|G|2360
4YBB|1|DA|G|2361
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain D4
- 50S ribosomal protein L35
- Chain DM
- 50S ribosomal protein L15
- Chain DX
- 50S ribosomal protein L27
Coloring options: