3D structure

PDB id
4YY3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S ribosomal subunit- HigB complex
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
GCUCAAC
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4YY3_014 not in the Motif Atlas
Homologous match to HL_4LFB_014
Geometric discrepancy: 0.0755
The information below is about HL_4LFB_014
Detailed Annotation
GNRA-like with tWH
Broad Annotation
GNRA
Motif group
HL_92337.1
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
3

Unit IDs

4YY3|1|A|G|617
4YY3|1|A|C|618
4YY3|1|A|U|619
4YY3|1|A|C|620
4YY3|1|A|A|621
4YY3|1|A|A|622
4YY3|1|A|C|623

Current chains

Chain A
16S rRNA

Nearby chains

Chain D
30S ribosomal protein S4
Chain P
30S ribosomal protein S16

Coloring options:


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