HL_4YZV_091
3D structure
- PDB id
- 4YZV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGACGGAAAUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4YZV_091 not in the Motif Atlas
- Homologous match to HL_5J7L_188
- Geometric discrepancy: 0.1429
- The information below is about HL_5J7L_188
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11805.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
4YZV|1|RA|G|2303
4YZV|1|RA|G|2304
4YZV|1|RA|A|2305
4YZV|1|RA|C|2306
4YZV|1|RA|G|2307
4YZV|1|RA|G|2308
4YZV|1|RA|A|2309
4YZV|1|RA|A|2310
4YZV|1|RA|A|2311
4YZV|1|RA|U|2312
4YZV|1|RA|C|2313
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain QV
- Transfer RNA; tRNA
- Chain RB
- 5S ribosomal RNA; 5S rRNA
- Chain RG
- 50S ribosomal protein L5
Coloring options: