HL_4YZV_124
3D structure
- PDB id
- 4YZV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 4YZV|1|XA|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4YZV_124 not in the Motif Atlas
- Homologous match to HL_4LFB_017
- Geometric discrepancy: 0.0926
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
4YZV|1|XA|G|786
4YZV|1|XA|A|787
4YZV|1|XA|U|788
4YZV|1|XA|U|789
4YZV|1|XA|A|790
4YZV|1|XA|G|791
4YZV|1|XA|A|792
4YZV|1|XA|U|793
4YZV|1|XA|A|794
4YZV|1|XA|C|795
4YZV|1|XA|C|796
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XK
- 30S ribosomal protein S11
- Chain XV
- Transfer RNA; tRNA
- Chain XX
- messenger RNA
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: