HL_4Z3S_061

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

C(2MU)GUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: 2MU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4Z3S_061 not in the Motif Atlas

Homologous match to HL_5J7L_195

Geometric discrepancy: 0.089

The information below is about HL_5J7L_195

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

4Z3S|1|1A|C|2551
4Z3S|1|1A|2MU|2552
4Z3S|1|1A|G|2553
4Z3S|1|1A|U|2554
4Z3S|1|1A|U|2555
4Z3S|1|1A|C|2556
4Z3S|1|1A|G|2557

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1w

Transfer RNA; tRNA