HL_4Z3S_138

3D structure

PDB id

4Z3S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

CGAUAACG

Length

8 nucleotides

Bulged bases

4Z3S|1|2A|U|958, 4Z3S|1|2A|C|961

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4Z3S_138 not in the Motif Atlas

Homologous match to HL_7RQB_027

Geometric discrepancy: 0.0986

The information below is about HL_7RQB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

4Z3S|1|2A|C|955
4Z3S|1|2A|G|956
4Z3S|1|2A|A|957
4Z3S|1|2A|U|958
4Z3S|1|2A|A|959
4Z3S|1|2A|A|960
4Z3S|1|2A|C|961
4Z3S|1|2A|G|962

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2B

5S ribosomal RNA; 5S rRNA

Chain 2Q

50S ribosomal protein L16