HL_4Z3S_225
3D structure
- PDB id
- 4Z3S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.65 Å
Loop
- Sequence
- G(PSU)AAC(5MU)A(PSU)AA(4OC)
- Length
- 11 nucleotides
- Bulged bases
- 4Z3S|1|1A|A|1913
- QA status
- Modified nucleotides: PSU, 5MU, 4OC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4Z3S_225 not in the Motif Atlas
- Homologous match to HL_5J7L_181
- Geometric discrepancy: 0.4143
- The information below is about HL_5J7L_181
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25847.2
- Basepair signature
- cWW-F-cSH-tHW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
4Z3S|1|1A|G|1910
4Z3S|1|1A|PSU|1911
4Z3S|1|1A|A|1912
4Z3S|1|1A|A|1913
4Z3S|1|1A|C|1914
4Z3S|1|1A|5MU|1915
4Z3S|1|1A|A|1916
4Z3S|1|1A|PSU|1917
4Z3S|1|1A|A|1918
4Z3S|1|1A|A|1919
4Z3S|1|1A|4OC|1920
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1a
- Small subunit ribosomal RNA; SSU rRNA
- Chain 1v
- mRNA
- Chain 1w
- Transfer RNA; tRNA
- Chain 1x
- Transfer RNA; tRNA
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