HL_4ZNP_003

3D structure

PDB id

4ZNP (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of A pfI Riboswitch Bound to ZMP

Experimental method

X-RAY DIFFRACTION

Resolution

2.94 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

4ZNP|1|B|A|30

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4ZNP_003 not in the Motif Atlas

Geometric match to HL_4ZNP_001

Geometric discrepancy: 0.1096

The information below is about HL_4ZNP_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80709.5

Basepair signature

cWW-F-F-F

Number of instances in this motif group

12

Unit IDs

4ZNP|1|B|G|26
4ZNP|1|B|G|27
4ZNP|1|B|A|28
4ZNP|1|B|A|29
4ZNP|1|B|A|30
4ZNP|1|B|C|31

Current chains

Chain B

pfI Riboswitch

Nearby chains

Chain A

ZMP/ZTP riboswitch