HL_4ZSN_069

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GGUCGUC

Length

7 nucleotides

Bulged bases

4ZSN|1|RA|G|1325, 4ZSN|1|RA|U|1329

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4ZSN_069 not in the Motif Atlas

Geometric match to HL_7RQB_034

Geometric discrepancy: 0.0679

The information below is about HL_7RQB_034

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46680.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

27

Unit IDs

4ZSN|1|RA|G|1324
4ZSN|1|RA|G|1325
4ZSN|1|RA|U|1326
4ZSN|1|RA|C|1327
4ZSN|1|RA|G|1328
4ZSN|1|RA|U|1329
4ZSN|1|RA|C|1330

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RR

50S ribosomal protein L17

Chain RW

50S ribosomal protein L22