HL_4ZSN_142
3D structure
- PDB id
- 4ZSN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S-wild-type HigB toxin complex bound to a AAA lysine codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GUUCAAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4ZSN_142 not in the Motif Atlas
- Homologous match to HL_5HR7_006
- Geometric discrepancy: 0.082
- The information below is about HL_5HR7_006
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 96
Unit IDs
4ZSN|1|XV|G|53
4ZSN|1|XV|U|54
4ZSN|1|XV|U|55
4ZSN|1|XV|C|56
4ZSN|1|XV|A|57
4ZSN|1|XV|A|58
4ZSN|1|XV|A|59
4ZSN|1|XV|U|60
4ZSN|1|XV|C|61
Current chains
- Chain XV
- P-site tRNA-fMet
Nearby chains
- Chain YA
- Large subunit ribosomal RNA; LSU rRNA
- Chain YG
- 50S ribosomal protein L5
- Chain YQ
- 50S ribosomal protein L16
Coloring options: