HL_4ZSN_171

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

4ZSN|1|YA|A|1095

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4ZSN_171 not in the Motif Atlas

Geometric match to HL_4V9F_019

Geometric discrepancy: 0.367

The information below is about HL_4V9F_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41169.1

Basepair signature

cWW-tSH-F

Number of instances in this motif group

4

Unit IDs

4ZSN|1|YA|C|1092
4ZSN|1|YA|G|1093
4ZSN|1|YA|U|1094
4ZSN|1|YA|A|1095
4ZSN|1|YA|A|1096
4ZSN|1|YA|U|1097
4ZSN|1|YA|A|1098
4ZSN|1|YA|G|1099

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YH

50S ribosomal protein L6