HL_5ADY_014
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GACACGUGGUAUC
- Length
- 13 nucleotides
- Bulged bases
- 5ADY|1|B|G|386
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ADY_014 not in the Motif Atlas
- Homologous match to HL_4WF9_013
- Geometric discrepancy: 0.31
- The information below is about HL_4WF9_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69139.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
5ADY|1|B|G|381
5ADY|1|B|A|382
5ADY|1|B|C|383
5ADY|1|B|A|384
5ADY|1|B|C|385
5ADY|1|B|G|386
5ADY|1|B|U|387
5ADY|1|B|G|388
5ADY|1|B|G|389
5ADY|1|B|U|390
5ADY|1|B|A|391
5ADY|1|B|U|392
5ADY|1|B|C|393
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain X
- 50S RIBOSOMAL PROTEIN L28
Coloring options: