HL_5ADY_024
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- UGUUGAAAAA
- Length
- 10 nucleotides
- Bulged bases
- 5ADY|1|B|U|747, 5ADY|1|B|A|751
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ADY_024 not in the Motif Atlas
- Homologous match to HL_7A0S_022
- Geometric discrepancy: 0.2561
- The information below is about HL_7A0S_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
5ADY|1|B|U|744
5ADY|1|B|G|745
5ADY|1|B|U|746
5ADY|1|B|U|747
5ADY|1|B|G|748
5ADY|1|B|A|749
5ADY|1|B|A|750
5ADY|1|B|A|751
5ADY|1|B|A|752
5ADY|1|B|A|753
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 0
- 50S RIBOSOMAL PROTEIN L32
- Chain 2
- 50S RIBOSOMAL PROTEIN L34
- Chain D
- 50S RIBOSOMAL PROTEIN L3
- Chain S
- 50S RIBOSOMAL PROTEIN L22
Coloring options: