HL_5ADY_047
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GUUUAUUAAAAAC
- Length
- 13 nucleotides
- Bulged bases
- 5ADY|1|B|A|1780, 5ADY|1|B|U|1781, 5ADY|1|B|U|1782
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ADY_047 not in the Motif Atlas
- Homologous match to HL_7A0S_045
- Geometric discrepancy: 0.258
- The information below is about HL_7A0S_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50951.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
5ADY|1|B|G|1776
5ADY|1|B|U|1777
5ADY|1|B|U|1778
5ADY|1|B|U|1779
5ADY|1|B|A|1780
5ADY|1|B|U|1781
5ADY|1|B|U|1782
5ADY|1|B|A|1783
5ADY|1|B|A|1784
5ADY|1|B|A|1785
5ADY|1|B|A|1786
5ADY|1|B|A|1787
5ADY|1|B|C|1788
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 2
- 50S RIBOSOMAL PROTEIN L34
- Chain C
- 50S RIBOSOMAL PROTEIN L2
Coloring options: