HL_5ADY_051

3D structure

PDB id

5ADY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

5ADY|1|B|U|1955

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ADY_051 not in the Motif Atlas

Homologous match to HL_4WF9_046

Geometric discrepancy: 0.2626

The information below is about HL_4WF9_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61418.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

12

Unit IDs

5ADY|1|B|G|1949
5ADY|1|B|G|1950
5ADY|1|B|U|1951
5ADY|1|B|A|1952
5ADY|1|B|A|1953
5ADY|1|B|G|1954
5ADY|1|B|U|1955
5ADY|1|B|U|1956
5ADY|1|B|C|1957

Current chains

Chain B

23S RRNA

Nearby chains

Chain 6

GTPASE HFLX

Chain K

50S RIBOSOMAL PROTEIN L14