HL_5ADY_061

3D structure

PDB id

5ADY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of the 50S ribosome subunit bound with HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

UGAAUGGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ADY_061 not in the Motif Atlas

Homologous match to HL_7A0S_058

Geometric discrepancy: 0.2253

The information below is about HL_7A0S_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51853.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

5ADY|1|B|U|2404
5ADY|1|B|G|2405
5ADY|1|B|A|2406
5ADY|1|B|A|2407
5ADY|1|B|U|2408
5ADY|1|B|G|2409
5ADY|1|B|G|2410
5ADY|1|B|A|2411
5ADY|1|B|A|2412
5ADY|1|B|G|2413

Current chains

Chain B

23S RRNA

Nearby chains

Chain L

50S RIBOSOMAL PROTEIN L15