HL_5ADY_087
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- UUUAUUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 5ADY|1|B|A|1780, 5ADY|1|B|U|1781, 5ADY|1|B|U|1782, 5ADY|1|B|A|1786
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ADY_087 not in the Motif Atlas
- Homologous match to HL_5J7L_178
- Geometric discrepancy: 0.2884
- The information below is about HL_5J7L_178
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01962.2
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
5ADY|1|B|U|1777
5ADY|1|B|U|1778
5ADY|1|B|U|1779
5ADY|1|B|A|1780
5ADY|1|B|U|1781
5ADY|1|B|U|1782
5ADY|1|B|A|1783
5ADY|1|B|A|1784
5ADY|1|B|A|1785
5ADY|1|B|A|1786
5ADY|1|B|A|1787
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 2
- 50S RIBOSOMAL PROTEIN L34
- Chain C
- 50S RIBOSOMAL PROTEIN L2
Coloring options: