HL_5AJ0_016

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCUUGAAACA

Length

10 nucleotides

Bulged bases

5AJ0|1|A2|C|1308

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_73671.1

Basepair signature

cWW-R-R-tWH-R-R-R

Number of instances in this motif group

117

Unit IDs

5AJ0|1|A2|U|1300
5AJ0|1|A2|C|1301
5AJ0|1|A2|U|1302
5AJ0|1|A2|U|1303
5AJ0|1|A2|G|1304
5AJ0|1|A2|A|1305
5AJ0|1|A2|A|1306
5AJ0|1|A2|A|1307
5AJ0|1|A2|C|1308
5AJ0|1|A2|A|1309

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AB

60S ribosomal protein L3

Chain Aa

60S ribosomal protein L27a

Chain Ae

60S ribosomal protein L32