HL_5AJ0_029

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GGAUGAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89583.1

Basepair signature

cWW-R-R-R-R-R

Number of instances in this motif group

14

Unit IDs

5AJ0|1|A2|G|1867
5AJ0|1|A2|G|1868
5AJ0|1|A2|A|1869
5AJ0|1|A2|U|1870
5AJ0|1|A2|G|1871
5AJ0|1|A2|A|1872
5AJ0|1|A2|A|1873
5AJ0|1|A2|C|1874

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain A4

5S ribosomal RNA; 5S rRNA

Chain AF

60S ribosomal protein L7

Chain Ae

60S ribosomal protein L32

Chain Af

60S ribosomal protein L35a