HL_5AJ0_034

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

ACGAGAACU

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_73671.1

Basepair signature

cWW-R-R-tWH-R-R-R

Number of instances in this motif group

117

Unit IDs

5AJ0|1|A2|A|2355
5AJ0|1|A2|C|2356
5AJ0|1|A2|G|2357
5AJ0|1|A2|A|2358
5AJ0|1|A2|G|2359
5AJ0|1|A2|A|2360
5AJ0|1|A2|A|2361
5AJ0|1|A2|C|2362
5AJ0|1|A2|U|2363

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain AP

60S ribosomal protein L17

Chain AR

60S ribosomal protein L19

Chain Ad

60S ribosomal protein L31