HL_5AJ0_048
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGC
- Length
- 3 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5AJ0_048 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.3828
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
5AJ0|1|A2|G|2880
5AJ0|1|A2|G|2881
5AJ0|1|A2|C|3569
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain AR
- 60S ribosomal protein L19
- Chain BI
- 40S ribosomal protein S8
- Chain BL
- 40S ribosomal protein S11
Coloring options: