3D structure

PDB id
5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo electron microscopy of actively translating human polysomes (POST state).
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
CGUGAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_30528.1
Basepair signature
cWW-tSH-R-R
Number of instances in this motif group
400

Unit IDs

5AJ0|1|A2|C|4502
5AJ0|1|A2|G|4503
5AJ0|1|A2|U|4504
5AJ0|1|A2|G|4505
5AJ0|1|A2|A|4506
5AJ0|1|A2|G|4507

Current chains

Chain A2
28S ribosomal RNA

Nearby chains

Chain AA
60S ribosomal protein L8
Chain Bv
Transfer RNA; tRNA

Coloring options:

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