HL_5AJ0_077

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CACUUG

Length

6 nucleotides

Bulged bases

5AJ0|1|A3|U|111

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69432.1

Basepair signature

cWW-R-tSW-R

Number of instances in this motif group

8

Unit IDs

5AJ0|1|A3|C|107
5AJ0|1|A3|A|108
5AJ0|1|A3|C|109
5AJ0|1|A3|U|110
5AJ0|1|A3|U|111
5AJ0|1|A3|G|112

Current chains

Chain A3

5.8S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain AX

60S ribosomal protein L23a

Chain Aj

60S ribosomal protein L37

Chain Al

60S ribosomal protein L39