HL_5AJ0_094

3D structure

PDB id

5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo electron microscopy of actively translating human polysomes (POST state).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UCCACUUUAAAUCCUUUAA

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5AJ0|1|B1|U|566
5AJ0|1|B1|C|567
5AJ0|1|B1|C|568
5AJ0|1|B1|A|569
5AJ0|1|B1|C|570
5AJ0|1|B1|U|571
5AJ0|1|B1|U|572
5AJ0|1|B1|U|573
5AJ0|1|B1|A|574
5AJ0|1|B1|A|575
5AJ0|1|B1|A|576
5AJ0|1|B1|U|577
5AJ0|1|B1|C|578
5AJ0|1|B1|C|579
5AJ0|1|B1|U|580
5AJ0|1|B1|U|581
5AJ0|1|B1|U|582
5AJ0|1|B1|A|583
5AJ0|1|B1|A|584

Current chains

Chain B1

18S ribosomal RNA

Nearby chains

Chain BE

40S ribosomal protein S4, Y isoform 1

Chain BJ

40S ribosomal protein S9

Chain BY

40S ribosomal protein S24