HL_5AJ0_112
3D structure
- PDB id
- 5AJ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo electron microscopy of actively translating human polysomes (POST state).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGUUCAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5AJ0_112 not in the Motif Atlas
- Geometric match to HL_5U3G_001
- Geometric discrepancy: 0.2342
- The information below is about HL_5U3G_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.5
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 19
Unit IDs
5AJ0|1|B1|C|1460
5AJ0|1|B1|G|1461
5AJ0|1|B1|U|1462
5AJ0|1|B1|U|1463
5AJ0|1|B1|C|1464
5AJ0|1|B1|A|1465
5AJ0|1|B1|G|1466
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain BR
- 40S ribosomal protein S17-like
Coloring options: