HL_5AJ3_017

3D structure

PDB id

5AJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the small subunit of the mammalian mitoribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UAGCACA

Length

7 nucleotides

Bulged bases

5AJ3|1|A|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_03712.1

Basepair signature

cWW-R-R-R

Number of instances in this motif group

14

Unit IDs

5AJ3|1|A|U|664
5AJ3|1|A|A|665
5AJ3|1|A|G|666
5AJ3|1|A|C|667
5AJ3|1|A|A|668
5AJ3|1|A|C|669
5AJ3|1|A|A|670

Current chains

Chain A

MITORIBOSOMAL 12S RRNA

Nearby chains

Chain C

MITORIBOSOMAL PROTEIN US3M, MRPS24

Chain G

MITORIBOSOMAL PROTEIN US7M, MRPS7

Chain I

MITORIBOSOMAL PROTEIN US9M, MRPS9

Chain J

MITORIBOSOMAL PROTEIN US10M, MRPS10

Chain N

MITORIBOSOMAL PROTEIN US14M, MRPS14