HL_5AJ4_025
3D structure
- PDB id
- 5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 55S mammalian mitoribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GAUUACCCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5AJ4_025 not in the Motif Atlas
- Homologous match to HL_7RQB_017
- Geometric discrepancy: 0.461
- The information below is about HL_7RQB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ4|1|BA|G|166
5AJ4|1|BA|A|167
5AJ4|1|BA|U|168
5AJ4|1|BA|U|169
5AJ4|1|BA|A|170
5AJ4|1|BA|C|171
5AJ4|1|BA|C|172
5AJ4|1|BA|C|173
5AJ4|1|BA|C|174
Current chains
- Chain BA
- MITORIBOSOMAL 16S Ribosomal RNA
Nearby chains
- Chain BN
- MITORIBOSOMAL PROTEIN UL13M, MRPL13
- Chain BU
- MITORIBOSOMAL PROTEIN BL20M, MRPL20
- Chain BV
- MITORIBOSOMAL PROTEIN BL21M, MRPL21
- Chain BW
- MITORIBOSOMAL PROTEIN UL22M, MRPL22
- Chain Bf
- MITORIBOSOMAL PROTEIN ML42, MRPL42
- Chain Bg
- MITORIBOSOMAL PROTEIN ML43, MRPL43
Coloring options: