HL_5AJ4_032
3D structure
- PDB id
- 5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 55S mammalian mitoribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- AACCCUAAAU
- Length
- 10 nucleotides
- Bulged bases
- 5AJ4|1|BA|C|403
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5AJ4_032 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.349
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
5AJ4|1|BA|A|400
5AJ4|1|BA|A|401
5AJ4|1|BA|C|402
5AJ4|1|BA|C|403
5AJ4|1|BA|C|404
5AJ4|1|BA|U|405
5AJ4|1|BA|A|406
5AJ4|1|BA|A|407
5AJ4|1|BA|A|408
5AJ4|1|BA|U|409
Current chains
- Chain BA
- MITORIBOSOMAL 16S Ribosomal RNA
Nearby chains
- Chain B0
- MITORIBOSOMAL PROTEIN BL27M, MRPL27
- Chain B3
- MITORIBOSOMAL PROTEIN UL30M, MRPL30
- Chain BQ
- MITORIBOSOMAL PROTEIN UL16M, MRPL16
- Chain Bb
- MITORIBOSOMAL PROTEIN ML38, MRPL38
- Chain Bk
- MITORIBOSOMAL PROTEIN ML48, MRPL48
Coloring options: